Package: BioPETsurv 0.1.0
BioPETsurv: Biomarker Prognostic Enrichment Tool for clinical trials with survival outcomes
Prognostic Enrichment is a clinical trial strategy of evaluating an intervention in a patient population with a higher rate of the unwanted clinical event than the broader patient population (R. Temple (2010) DOI:10.1038/clpt.2010.233). A higher event rate translates to a lower sample size for the clinical trial, which can have both practical and ethical advantages. This package provides tools to evaluate biomarkers for prognostic enrichment of clinical trials with survival/time-to-event outcomes.
Authors:
BioPETsurv_0.1.0.tar.gz
BioPETsurv_0.1.0.zip(r-4.5)BioPETsurv_0.1.0.zip(r-4.4)BioPETsurv_0.1.0.zip(r-4.3)
BioPETsurv_0.1.0.tgz(r-4.4-any)BioPETsurv_0.1.0.tgz(r-4.3-any)
BioPETsurv_0.1.0.tar.gz(r-4.5-noble)BioPETsurv_0.1.0.tar.gz(r-4.4-noble)
BioPETsurv_0.1.0.tgz(r-4.4-emscripten)BioPETsurv_0.1.0.tgz(r-4.3-emscripten)
BioPETsurv.pdf |BioPETsurv.html✨
BioPETsurv/json (API)
| # Install 'BioPETsurv' in R: |
| install.packages('BioPETsurv', repos = c('https://chengs94.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/chengs94/biopetsurv/issues
- SurvMarkers - Example dataset for package 'BioPETsurv'
Last updated 5 years agofrom:413a14d89f. Checks:OK: 1 ERROR: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 31 2024 |
| R-4.5-win | ERROR | Oct 31 2024 |
| R-4.5-linux | ERROR | Oct 31 2024 |
| R-4.4-win | ERROR | Oct 31 2024 |
| R-4.4-mac | ERROR | Oct 31 2024 |
| R-4.3-win | ERROR | Oct 31 2024 |
| R-4.3-mac | ERROR | Oct 31 2024 |
Exports:sim_datasurv_enrichmentsurv_plot_enrichmentsurvROC
Dependencies:clicolorspacefansifarverggplot2gluegridExtragtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalessurvivaltibbleutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Simulating Biomarker and Survival Observations | sim_data |
| Prognostic Enrichment for Clinical Trials with Survival Outcomes | surv_enrichment |
| Plotting Clinical Trial Metrics for Prognostic Enrichment (Survival Outcomes) | surv_plot_enrichment |
| Example dataset for package 'BioPETsurv' | SurvMarkers |
